Liste des publications

2024

• Hi-M: A Multiplex Oligopaint FISH Method to Capture Chromatin Conformations In Situ and Accompanying Open-Source Acquisition Software

  Fiche JB, Schaeffer M, Houbron C, Elkhoury Youhanna C, Messina O, Barho F, Nollmann M, Methods Mol Biol, 2024

• pyHiM: a new open-source, multi-platform software package for spatial genomics based on multiplexed DNA-FISH imaging

  Devos X, Fiche JB, Bardou M, Messina O, Houbron C, Gurgo J, Schaeffer M, Goetz M, Walter T, Mueller F, Nollmann M, Genome Biol, 2024

2021

• Cis-regulatory chromatin loops arise before TADs and gene activation, and are independent of cell fate during early Drosophila development

  Espinola SM, Gotz M, Bellec M, Messina O, Fiche JB, Houbron C, Dejean M, Reim I, Cardozo Gizzi AM, Lagha M, Nollmann M, Nat Genet, 2021

2020

• Direct and simultaneous observation of transcription and chromosome architecture in single cells with Hi-M

  Cardozo Gizzi AM, Espinola SM, Gurgo J, Houbron C, Fiche JB, Cattoni DI, Nollmann M, Nat Protoc, 2020

2019

• Microscopy-Based Chromosome Conformation Capture Enables Simultaneous Visualization of Genome Organization and Transcription in Intact Organisms

  Cardozo Gizzi AM, Cattoni DI, Fiche JB, Espinola SM, Gurgo J, Messina O, Houbron C, Ogiyama Y, Papadopoulos GL, Cavalli G, Lagha M, Nollmann M, Mol Cell, 2019

2017

• Single-cell absolute contact probability detection reveals chromosomes are organized by multiple low-frequency yet specific interactions

  Cattoni DI, Gizzi AMC, Georgieva M, Di Stefano M, Valeri A, Chamousset D, Houbron C, Dejardin S, Fiche JB, Gonzalez I, Chang JM, Sexton T, Marti-Renom MA, Bantignies F, Cavalli G, Nollmann M, Nat Commun, 2017